Cluster: HRGMv2_3490_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3490_1 | HRGMv2_3490_1_191 | 211579 | 212688 | - | GT28 |
| pfam | HRGMv2_3490_1 | HRGMv2_3490_1_192 | 212685 | 214097 | - | AlaDh_PNT_C | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3490_1 | HRGMv2_3490_1_193 | 214116 | 215075 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3490_1_191
Type: CAZyme
Location: 211579 - 212688 (-)
Type: CAZyme
Location: 211579 - 212688 (-)
Gene ID: HRGMv2_3490_1_192
Type: pfam
Location: 212685 - 214097 (-)
Type: pfam
Location: 212685 - 214097 (-)
Gene ID: HRGMv2_3490_1_193
Type: TC
Location: 214116 - 215075 (-)
Type: TC
Location: 214116 - 215075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.