Cluster: HRGMv2_3490_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_29 | HRGMv2_3490_29_10 | 6896 | 8815 | - | 3.D.7.2.3 |
| TC | HRGMv2_3490_29 | HRGMv2_3490_29_11 | 8835 | 9935 | - | 3.D.7.2.3 |
| NULL(UNKNOWN) | HRGMv2_3490_29 | HRGMv2_3490_29_12 | 10075 | 10263 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3490_29 | HRGMv2_3490_29_13 | 10702 | 11118 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3490_29 | HRGMv2_3490_29_14 | 11301 | 12647 | - | GH4 |
Gene ID: HRGMv2_3490_29_10
Type: TC
Location: 6896 - 8815 (-)
Type: TC
Location: 6896 - 8815 (-)
Gene ID: HRGMv2_3490_29_11
Type: TC
Location: 8835 - 9935 (-)
Type: TC
Location: 8835 - 9935 (-)
Gene ID: HRGMv2_3490_29_12
Type:
Location: 10075 - 10263 (-)
Type:
Location: 10075 - 10263 (-)
Gene ID: HRGMv2_3490_29_13
Type:
Location: 10702 - 11118 (+)
Type:
Location: 10702 - 11118 (+)
Gene ID: HRGMv2_3490_29_14
Type: CAZyme
Location: 11301 - 12647 (-)
Type: CAZyme
Location: 11301 - 12647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.