Cluster: HRGMv2_3490_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3490
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_12 | HRGMv2_3490_12_11 | 12518 | 13315 | + | 5.A.3.2.1 |
| pfam | HRGMv2_3490_12 | HRGMv2_3490_12_12 | 13312 | 14493 | + | NrfD |
| CAZyme | HRGMv2_3490_12 | HRGMv2_3490_12_13 | 14644 | 16218 | + | GT83 |
| CAZyme | HRGMv2_3490_12 | HRGMv2_3490_12_14 | 16215 | 17201 | + | GT2 |
Gene ID: HRGMv2_3490_12_11
Type: TC
Location: 12518 - 13315 (+)
Type: TC
Location: 12518 - 13315 (+)
Gene ID: HRGMv2_3490_12_12
Type: pfam
Location: 13312 - 14493 (+)
Type: pfam
Location: 13312 - 14493 (+)
Gene ID: HRGMv2_3490_12_13
Type: CAZyme
Location: 14644 - 16218 (+)
Type: CAZyme
Location: 14644 - 16218 (+)
Gene ID: HRGMv2_3490_12_14
Type: CAZyme
Location: 16215 - 17201 (+)
Type: CAZyme
Location: 16215 - 17201 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.