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Cluster: HRGMv2_3490_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3490_8 HRGMv2_3490_8_66 66572 67918 - 2.A.26.1.1
TC HRGMv2_3490_8 HRGMv2_3490_8_67 68133 69020 - 2.A.7.3.52
TC HRGMv2_3490_8 HRGMv2_3490_8_68 69131 70546 - 2.A.8.1.14
pfam HRGMv2_3490_8 HRGMv2_3490_8_69 70858 71436 - Flavodoxin_3 | Flavodoxin_5
TC HRGMv2_3490_8 HRGMv2_3490_8_70 71654 72181 + 2.A.88.3.1
pfam HRGMv2_3490_8 HRGMv2_3490_8_71 72654 73745 - Hydrolase | HAD
pfam HRGMv2_3490_8 HRGMv2_3490_8_72 73889 74275 - Ribonuc_L-PSP
CAZyme HRGMv2_3490_8 HRGMv2_3490_8_73 74664 76460 - GH9
CAZyme HRGMv2_3490_8 HRGMv2_3490_8_74 76465 77250 - GH16_21
CAZyme HRGMv2_3490_8 HRGMv2_3490_8_75 77318 78748 - GH1
TC HRGMv2_3490_8 HRGMv2_3490_8_76 78745 79071 - 4.A.3.2.9
TC HRGMv2_3490_8 HRGMv2_3490_8_77 79077 79379 - 4.A.3.2.5
TC HRGMv2_3490_8 HRGMv2_3490_8_78 79485 80774 - 1.B.23.1.3
TC HRGMv2_3490_8 HRGMv2_3490_8_79 80838 82145 - 4.A.3.2.8
Gene ID: HRGMv2_3490_8_66
Type: TC
Location: 66572 - 67918 (-)
Gene ID: HRGMv2_3490_8_67
Type: TC
Location: 68133 - 69020 (-)
Gene ID: HRGMv2_3490_8_68
Type: TC
Location: 69131 - 70546 (-)
Gene ID: HRGMv2_3490_8_69
Type: pfam
Location: 70858 - 71436 (-)
Gene ID: HRGMv2_3490_8_70
Type: TC
Location: 71654 - 72181 (+)
Gene ID: HRGMv2_3490_8_71
Type: pfam
Location: 72654 - 73745 (-)
Gene ID: HRGMv2_3490_8_72
Type: pfam
Location: 73889 - 74275 (-)
Gene ID: HRGMv2_3490_8_73
Type: CAZyme
Location: 74664 - 76460 (-)
Gene ID: HRGMv2_3490_8_74
Type: CAZyme
Location: 76465 - 77250 (-)
Gene ID: HRGMv2_3490_8_75
Type: CAZyme
Location: 77318 - 78748 (-)
Gene ID: HRGMv2_3490_8_76
Type: TC
Location: 78745 - 79071 (-)
Gene ID: HRGMv2_3490_8_77
Type: TC
Location: 79077 - 79379 (-)
Gene ID: HRGMv2_3490_8_78
Type: TC
Location: 79485 - 80774 (-)
Gene ID: HRGMv2_3490_8_79
Type: TC
Location: 80838 - 82145 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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