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Cluster: HRGMv2_3490_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3490_5 HRGMv2_3490_5_53 58911 60650 + 3.A.1.203.4
TC HRGMv2_3490_5 HRGMv2_3490_5_54 61061 61774 + 1.B.23.1.23
NULL(UNKNOWN) HRGMv2_3490_5 HRGMv2_3490_5_55 61771 62646 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3490_5 HRGMv2_3490_5_56 62866 63516 + CBM27
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_57 63537 66212 + CBM23 | CBM27 | GH26
TC HRGMv2_3490_5 HRGMv2_3490_5_58 66479 67048 + 3.A.11.2.1
pfam HRGMv2_3490_5 HRGMv2_3490_5_59 67089 69548 + Lactamase_B | Competence | Lactamase_B_2 | DUF4131
NULL(UNKNOWN) HRGMv2_3490_5 HRGMv2_3490_5_60 69786 70310 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3490_5 HRGMv2_3490_5_61 70407 71132 + 9.B.120.1.3
Gene ID: HRGMv2_3490_5_53
Type: TC
Location: 58911 - 60650 (+)
Gene ID: HRGMv2_3490_5_54
Type: TC
Location: 61061 - 61774 (+)
Gene ID: HRGMv2_3490_5_55
Type:
Location: 61771 - 62646 (+)
Gene ID: HRGMv2_3490_5_56
Type: pfam
Location: 62866 - 63516 (+)
Gene ID: HRGMv2_3490_5_57
Type: CAZyme
Location: 63537 - 66212 (+)
Gene ID: HRGMv2_3490_5_58
Type: TC
Location: 66479 - 67048 (+)
Gene ID: HRGMv2_3490_5_59
Type: pfam
Location: 67089 - 69548 (+)
Gene ID: HRGMv2_3490_5_60
Type:
Location: 69786 - 70310 (+)
Gene ID: HRGMv2_3490_5_61
Type: TC
Location: 70407 - 71132 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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