Cluster: HRGMv2_3440_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3440
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3440_2 | HRGMv2_3440_2_181 | 196326 | 197447 | - | 3.A.1.1.26 |
| TF | HRGMv2_3440_2 | HRGMv2_3440_2_182 | 197456 | 198628 | - | 0040266 |
| pfam | HRGMv2_3440_2 | HRGMv2_3440_2_183 | 198634 | 201642 | - | Glug |
| TC | HRGMv2_3440_2 | HRGMv2_3440_2_184 | 201644 | 202516 | - | 3.A.1.1.20 |
| pfam | HRGMv2_3440_2 | HRGMv2_3440_2_185 | 202526 | 203500 | - | BPD_transp_1 |
| CAZyme | HRGMv2_3440_2 | HRGMv2_3440_2_186 | 203516 | 204904 | - | GH16 |
| TC | HRGMv2_3440_2 | HRGMv2_3440_2_187 | 205099 | 206526 | + | 3.A.1.1.18 |
Gene ID: HRGMv2_3440_2_181
Type: TC
Location: 196326 - 197447 (-)
Type: TC
Location: 196326 - 197447 (-)
Gene ID: HRGMv2_3440_2_182
Type: TF
Location: 197456 - 198628 (-)
Type: TF
Location: 197456 - 198628 (-)
Gene ID: HRGMv2_3440_2_183
Type: pfam
Location: 198634 - 201642 (-)
Type: pfam
Location: 198634 - 201642 (-)
Gene ID: HRGMv2_3440_2_184
Type: TC
Location: 201644 - 202516 (-)
Type: TC
Location: 201644 - 202516 (-)
Gene ID: HRGMv2_3440_2_185
Type: pfam
Location: 202526 - 203500 (-)
Type: pfam
Location: 202526 - 203500 (-)
Gene ID: HRGMv2_3440_2_186
Type: CAZyme
Location: 203516 - 204904 (-)
Type: CAZyme
Location: 203516 - 204904 (-)
Gene ID: HRGMv2_3440_2_187
Type: TC
Location: 205099 - 206526 (+)
Type: TC
Location: 205099 - 206526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.