Cluster: HRGMv2_3440_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3440
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3440_9 | HRGMv2_3440_9_46 | 48835 | 49758 | + | 8.A.21.2.2 |
| pfam | HRGMv2_3440_9 | HRGMv2_3440_9_47 | 49823 | 50713 | + | ATP-grasp_3 | GSH-S_ATP | RimK |
| CAZyme | HRGMv2_3440_9 | HRGMv2_3440_9_48 | 50700 | 52211 | - | GH13_44 |
Gene ID: HRGMv2_3440_9_46
Type: TC
Location: 48835 - 49758 (+)
Type: TC
Location: 48835 - 49758 (+)
Gene ID: HRGMv2_3440_9_47
Type: pfam
Location: 49823 - 50713 (+)
Type: pfam
Location: 49823 - 50713 (+)
Gene ID: HRGMv2_3440_9_48
Type: CAZyme
Location: 50700 - 52211 (-)
Type: CAZyme
Location: 50700 - 52211 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.