Cluster: HRGMv2_3309_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3309
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3309_5 | HRGMv2_3309_5_34 | 29795 | 31597 | + | GT51 |
| pfam | HRGMv2_3309_5 | HRGMv2_3309_5_35 | 31730 | 33262 | + | Metalloenzyme | iPGM_N |
| STP | HRGMv2_3309_5 | HRGMv2_3309_5_36 | 33264 | 34529 | + | Peptidase_M23 |
| TC | HRGMv2_3309_5 | HRGMv2_3309_5_37 | 34552 | 35850 | + | 9.B.174.1.1 |
Gene ID: HRGMv2_3309_5_34
Type: CAZyme
Location: 29795 - 31597 (+)
Type: CAZyme
Location: 29795 - 31597 (+)
Gene ID: HRGMv2_3309_5_35
Type: pfam
Location: 31730 - 33262 (+)
Type: pfam
Location: 31730 - 33262 (+)
Gene ID: HRGMv2_3309_5_36
Type: STP
Location: 33264 - 34529 (+)
Type: STP
Location: 33264 - 34529 (+)
Gene ID: HRGMv2_3309_5_37
Type: TC
Location: 34552 - 35850 (+)
Type: TC
Location: 34552 - 35850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
Scatacola_A
Species
Scatacola_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.