Cluster: HRGMv2_3309_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3309
- CGC Family ID: CGCFAM_10354
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3309_4 | HRGMv2_3309_4_95 | 108727 | 109893 | - | GT4 |
| TC | HRGMv2_3309_4 | HRGMv2_3309_4_96 | 110131 | 111273 | + | 2.A.6.2.9 |
| TC | HRGMv2_3309_4 | HRGMv2_3309_4_97 | 111273 | 114524 | + | 2.A.6.2.22 |
| TC | HRGMv2_3309_4 | HRGMv2_3309_4_98 | 114511 | 115923 | + | 2.A.6.3.8 |
Gene ID: HRGMv2_3309_4_95
Type: CAZyme
Location: 108727 - 109893 (-)
Type: CAZyme
Location: 108727 - 109893 (-)
Gene ID: HRGMv2_3309_4_96
Type: TC
Location: 110131 - 111273 (+)
Type: TC
Location: 110131 - 111273 (+)
Gene ID: HRGMv2_3309_4_97
Type: TC
Location: 111273 - 114524 (+)
Type: TC
Location: 111273 - 114524 (+)
Gene ID: HRGMv2_3309_4_98
Type: TC
Location: 114511 - 115923 (+)
Type: TC
Location: 114511 - 115923 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
Scatacola_A
Species
Scatacola_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.