Cluster: HRGMv2_3309_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3309
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3309_1 | HRGMv2_3309_1_354 | 325319 | 326476 | - | GT92 |
| sulfatase | HRGMv2_3309_1 | HRGMv2_3309_1_355 | 326654 | 327391 | - | S1_2 |
| pfam | HRGMv2_3309_1 | HRGMv2_3309_1_356 | 327403 | 328347 | - | Acyl_transf_1 |
| CAZyme | HRGMv2_3309_1 | HRGMv2_3309_1_357 | 328471 | 329313 | + | GT2 |
| TC | HRGMv2_3309_1 | HRGMv2_3309_1_358 | 329399 | 331693 | + | 3.A.12.1.2 |
Gene ID: HRGMv2_3309_1_354
Type: CAZyme
Location: 325319 - 326476 (-)
Type: CAZyme
Location: 325319 - 326476 (-)
Gene ID: HRGMv2_3309_1_355
Type: sulfatase
Location: 326654 - 327391 (-)
Type: sulfatase
Location: 326654 - 327391 (-)
Gene ID: HRGMv2_3309_1_356
Type: pfam
Location: 327403 - 328347 (-)
Type: pfam
Location: 327403 - 328347 (-)
Gene ID: HRGMv2_3309_1_357
Type: CAZyme
Location: 328471 - 329313 (+)
Type: CAZyme
Location: 328471 - 329313 (+)
Gene ID: HRGMv2_3309_1_358
Type: TC
Location: 329399 - 331693 (+)
Type: TC
Location: 329399 - 331693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
Scatacola_A
Species
Scatacola_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.