Cluster: HRGMv2_3309_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3309
- CGC Family ID: CGCFAM_00654
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3309_11 | HRGMv2_3309_11_17 | 12637 | 14055 | + | 2.A.66.1.33 |
| peptidase | HRGMv2_3309_11 | HRGMv2_3309_11_18 | 14085 | 16352 | - | U32.UPW |
| CAZyme | HRGMv2_3309_11 | HRGMv2_3309_11_19 | 16383 | 17519 | - | GT2 |
Gene ID: HRGMv2_3309_11_17
Type: TC
Location: 12637 - 14055 (+)
Type: TC
Location: 12637 - 14055 (+)
Gene ID: HRGMv2_3309_11_18
Type: peptidase
Location: 14085 - 16352 (-)
Type: peptidase
Location: 14085 - 16352 (-)
Gene ID: HRGMv2_3309_11_19
Type: CAZyme
Location: 16383 - 17519 (-)
Type: CAZyme
Location: 16383 - 17519 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
Scatacola_A
Species
Scatacola_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.