Cluster: HRGMv2_3309_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3309
- CGC Family ID: CGCFAM_06015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3309_6 | HRGMv2_3309_6_57 | 55966 | 57339 | - | 1.B.17.1.4 |
| CAZyme | HRGMv2_3309_6 | HRGMv2_3309_6_58 | 57552 | 60023 | + | GT35 |
| NULL(UNKNOWN) | HRGMv2_3309_6 | HRGMv2_3309_6_59 | 60075 | 62444 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3309_6 | HRGMv2_3309_6_60 | 62661 | 65393 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_3309_6_57
Type: TC
Location: 55966 - 57339 (-)
Type: TC
Location: 55966 - 57339 (-)
Gene ID: HRGMv2_3309_6_58
Type: CAZyme
Location: 57552 - 60023 (+)
Type: CAZyme
Location: 57552 - 60023 (+)
Gene ID: HRGMv2_3309_6_59
Type:
Location: 60075 - 62444 (-)
Type:
Location: 60075 - 62444 (-)
Gene ID: HRGMv2_3309_6_60
Type: TC
Location: 62661 - 65393 (-)
Type: TC
Location: 62661 - 65393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
Scatacola_A
Species
Scatacola_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.