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Cluster: HRGMv2_3292_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3292_17 HRGMv2_3292_17_58 72723 73649 - CE4
NULL(UNKNOWN) HRGMv2_3292_17 HRGMv2_3292_17_59 73646 73942 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3292_17 HRGMv2_3292_17_60 74091 74444 + 9.B.35.1.2
pfam HRGMv2_3292_17 HRGMv2_3292_17_61 74603 79822 + ToxA_N | ToxA_N
pfam HRGMv2_3292_17 HRGMv2_3292_17_62 79806 80444 - LysE
TC HRGMv2_3292_17 HRGMv2_3292_17_63 80511 81857 - 2.A.40.7.6
pfam HRGMv2_3292_17 HRGMv2_3292_17_64 82150 82752 + GST_C | GST_N | GST_N_2 | GST_C_2 | GST_N_3 | GST_C_3
TF HRGMv2_3292_17 HRGMv2_3292_17_65 82855 83751 - HTH_1
TC HRGMv2_3292_17 HRGMv2_3292_17_66 83862 85154 + 2.A.11.1.2
Gene ID: HRGMv2_3292_17_58
Type: CAZyme
Location: 72723 - 73649 (-)
Gene ID: HRGMv2_3292_17_59
Type:
Location: 73646 - 73942 (-)
Gene ID: HRGMv2_3292_17_60
Type: TC
Location: 74091 - 74444 (+)
Gene ID: HRGMv2_3292_17_61
Type: pfam
Location: 74603 - 79822 (+)
Gene ID: HRGMv2_3292_17_62
Type: pfam
Location: 79806 - 80444 (-)
Gene ID: HRGMv2_3292_17_63
Type: TC
Location: 80511 - 81857 (-)
Gene ID: HRGMv2_3292_17_64
Type: pfam
Location: 82150 - 82752 (+)
Gene ID: HRGMv2_3292_17_65
Type: TF
Location: 82855 - 83751 (-)
Gene ID: HRGMv2_3292_17_66
Type: TC
Location: 83862 - 85154 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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