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Cluster: HRGMv2_3292_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3292_10 HRGMv2_3292_10_175 179570 180862 - 1.A.23.4.5
TC HRGMv2_3292_10 HRGMv2_3292_10_176 181055 182401 + 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_3292_10 HRGMv2_3292_10_177 182508 182777 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3292_10 HRGMv2_3292_10_178 182931 183320 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3292_10 HRGMv2_3292_10_179 183447 185162 + AA1
TC HRGMv2_3292_10 HRGMv2_3292_10_180 185155 186000 + 1.B.76.1.6
TC HRGMv2_3292_10 HRGMv2_3292_10_181 186050 186436 + 9.B.62.1.5
TC HRGMv2_3292_10 HRGMv2_3292_10_182 186433 187314 + 9.B.62.1.2
Gene ID: HRGMv2_3292_10_175
Type: TC
Location: 179570 - 180862 (-)
Gene ID: HRGMv2_3292_10_176
Type: TC
Location: 181055 - 182401 (+)
Gene ID: HRGMv2_3292_10_177
Type:
Location: 182508 - 182777 (-)
Gene ID: HRGMv2_3292_10_178
Type:
Location: 182931 - 183320 (+)
Gene ID: HRGMv2_3292_10_179
Type: CAZyme
Location: 183447 - 185162 (+)
Gene ID: HRGMv2_3292_10_180
Type: TC
Location: 185155 - 186000 (+)
Gene ID: HRGMv2_3292_10_181
Type: TC
Location: 186050 - 186436 (+)
Gene ID: HRGMv2_3292_10_182
Type: TC
Location: 186433 - 187314 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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