Cluster: HRGMv2_3292_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3292
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3292_9 | HRGMv2_3292_9_90 | 93997 | 95271 | + | GH68 |
| pfam | HRGMv2_3292_9 | HRGMv2_3292_9_91 | 95636 | 96025 | + | Tautomerase | Tautomerase_2 |
| TC | HRGMv2_3292_9 | HRGMv2_3292_9_92 | 96238 | 97494 | - | 2.A.1.2.26 |
Gene ID: HRGMv2_3292_9_90
Type: CAZyme
Location: 93997 - 95271 (+)
Type: CAZyme
Location: 93997 - 95271 (+)
Gene ID: HRGMv2_3292_9_91
Type: pfam
Location: 95636 - 96025 (+)
Type: pfam
Location: 95636 - 96025 (+)
Gene ID: HRGMv2_3292_9_92
Type: TC
Location: 96238 - 97494 (-)
Type: TC
Location: 96238 - 97494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E paracarnis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.