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Cluster: HRGMv2_3247_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3247_39 HRGMv2_3247_39_17 25101 25763 + 9.B.18.1.3
CAZyme HRGMv2_3247_39 HRGMv2_3247_39_18 25777 26556 + GT2
CAZyme HRGMv2_3247_39 HRGMv2_3247_39_19 26593 27405 + GT2
pfam HRGMv2_3247_39 HRGMv2_3247_39_20 27415 28602 + Glyphos_transf
NULL(UNKNOWN) HRGMv2_3247_39 HRGMv2_3247_39_21 28624 29745 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3247_39 HRGMv2_3247_39_22 29758 30522 + GT2
CAZyme HRGMv2_3247_39 HRGMv2_3247_39_23 30586 31692 + GT4
TC HRGMv2_3247_39 HRGMv2_3247_39_24 31768 33213 + 9.B.18.2.1
TC HRGMv2_3247_39 HRGMv2_3247_39_25 33225 34784 + 2.A.66.4.5
peptidase HRGMv2_3247_39 HRGMv2_3247_39_26 34916 36142 + C40.007
pfam HRGMv2_3247_39 HRGMv2_3247_39_27 36460 38616 + GHL10 | CW_binding_2 | CW_binding_2 | CW_binding_2
TC HRGMv2_3247_39 HRGMv2_3247_39_28 38705 40054 + 2.A.25.1.3
Gene ID: HRGMv2_3247_39_17
Type: TC
Location: 25101 - 25763 (+)
Gene ID: HRGMv2_3247_39_18
Type: CAZyme
Location: 25777 - 26556 (+)
Gene ID: HRGMv2_3247_39_19
Type: CAZyme
Location: 26593 - 27405 (+)
Gene ID: HRGMv2_3247_39_20
Type: pfam
Location: 27415 - 28602 (+)
Gene ID: HRGMv2_3247_39_21
Type:
Location: 28624 - 29745 (+)
Gene ID: HRGMv2_3247_39_22
Type: CAZyme
Location: 29758 - 30522 (+)
Gene ID: HRGMv2_3247_39_23
Type: CAZyme
Location: 30586 - 31692 (+)
Gene ID: HRGMv2_3247_39_24
Type: TC
Location: 31768 - 33213 (+)
Gene ID: HRGMv2_3247_39_25
Type: TC
Location: 33225 - 34784 (+)
Gene ID: HRGMv2_3247_39_26
Type: peptidase
Location: 34916 - 36142 (+)
Gene ID: HRGMv2_3247_39_27
Type: pfam
Location: 36460 - 38616 (+)
Gene ID: HRGMv2_3247_39_28
Type: TC
Location: 38705 - 40054 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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