PROTEIN: HRGMv2_3247_39_21
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3247_39_21.pdb
Genome ID:
Protein ID:
HRGMv2_3247_39_21
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MLKDKWRNLF GIIIVFMAVF KFYGDFFDMN SFSRYIMVLS LGLSTIMIAS EIRKFNITHL 60 LVLLLASVQF VMSKNITMAY VYYLCLGLYT CDFRLMVKWF MVFNAIFFSI YLVSNLLGIH 120 PTEYLEGRND FGFGNPNSSF ICMFLIWSSY FYYVFYSKKK IDFIALFLMA FLMYSQTITR 180 TGLLTAIVTA IAFLILRSID VRKKWNAILI GLFPAFMSIL SILIALFGSG NYYLNRVLSH 240 RPLYWHSYIT HPTSGINIFG YTPNIRDILF SQRMPLDSGY IWTLYSMGLI VFIVIIGFIC 300 LAMYNLCKED QKDKLLLLVS ILTYCFAESI LVDIASNISI ILLVYGISKF DIKSISLNKM 360 KLQRPKKFRK RIG 373
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 1 | 345 | 6 | 382 | 0.7003 |
0.821 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 1 | 371 | 19 | 601 | 0.6394 |
0.8658 |
| B7AUF6 | GT4 | 1 | 368 | 11 | 543 | 0.6174 |
0.8627 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 4 | 349 | 17 | 413 | 0.5328 |
0.8021 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 4 | 349 | 17 | 413 | 0.5315 |
0.8003 |
| AF-M4X4V7-F1-model_v4 | GH39 | 5 | 350 | 18 | 414 | 0.5303 |
0.7992 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 349 | 15 | 419 | 0.6752 |
0.7853 |
| A0A7L9SQD7 | GT4 | 1 | 371 | 19 | 601 | 0.6394 |
0.8658 |
| B7AUF6 | GT4 | 1 | 368 | 11 | 543 | 0.6174 |
0.8627 |
| M4X4V7 | GH39 | 5 | 350 | 18 | 414 | 0.5303 |
0.7992 |
| UII34295.1 | GT4 | 1 | 373 | 12 | 653 | 0.4941 |
0.6743 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02729-F1-model_v4 | 1 | 350 | 3 | 402 | 0.657 |
0.7672 |