Cluster: HRGMv2_3201_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3201_22 | HRGMv2_3201_22_25 | 28447 | 30378 | - | GT39 |
| pfam | HRGMv2_3201_22 | HRGMv2_3201_22_26 | 30475 | 31440 | - | PseudoU_synth_2 | S4 |
| TC | HRGMv2_3201_22 | HRGMv2_3201_22_27 | 31467 | 32813 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_3201_22_25
Type: CAZyme
Location: 28447 - 30378 (-)
Type: CAZyme
Location: 28447 - 30378 (-)
Gene ID: HRGMv2_3201_22_26
Type: pfam
Location: 30475 - 31440 (-)
Type: pfam
Location: 30475 - 31440 (-)
Gene ID: HRGMv2_3201_22_27
Type: TC
Location: 31467 - 32813 (-)
Type: TC
Location: 31467 - 32813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905202605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.