Cluster: HRGMv2_3201_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3201_10 | HRGMv2_3201_10_68 | 73240 | 74682 | - | 2.A.46.1.8 |
| CAZyme | HRGMv2_3201_10 | HRGMv2_3201_10_69 | 74979 | 76247 | - | CE4 |
| TF | HRGMv2_3201_10 | HRGMv2_3201_10_70 | 76374 | 77231 | - | HTH_6 |
| NULL(UNKNOWN) | HRGMv2_3201_10 | HRGMv2_3201_10_71 | 77453 | 78835 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3201_10 | HRGMv2_3201_10_72 | 78958 | 80331 | + | 2.A.66.1.25 |
Gene ID: HRGMv2_3201_10_68
Type: TC
Location: 73240 - 74682 (-)
Type: TC
Location: 73240 - 74682 (-)
Gene ID: HRGMv2_3201_10_69
Type: CAZyme
Location: 74979 - 76247 (-)
Type: CAZyme
Location: 74979 - 76247 (-)
Gene ID: HRGMv2_3201_10_70
Type: TF
Location: 76374 - 77231 (-)
Type: TF
Location: 76374 - 77231 (-)
Gene ID: HRGMv2_3201_10_71
Type:
Location: 77453 - 78835 (+)
Type:
Location: 77453 - 78835 (+)
Gene ID: HRGMv2_3201_10_72
Type: TC
Location: 78958 - 80331 (+)
Type: TC
Location: 78958 - 80331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp905202605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3201_10_72 | vegetarian > vegan | 1.45673 | 0.01924 |