Cluster: HRGMv2_3200_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_3 | HRGMv2_3200_3_86 | 102006 | 102527 | - | 9.B.156.3.1 |
| TC | HRGMv2_3200_3 | HRGMv2_3200_3_87 | 102524 | 103102 | - | 9.B.156.3.1 |
| TF | HRGMv2_3200_3 | HRGMv2_3200_3_88 | 103302 | 103550 | + | SpoVT_AbrB |
| CAZyme | HRGMv2_3200_3 | HRGMv2_3200_3_89 | 103706 | 104623 | - | GH25 |
Gene ID: HRGMv2_3200_3_86
Type: TC
Location: 102006 - 102527 (-)
Type: TC
Location: 102006 - 102527 (-)
Gene ID: HRGMv2_3200_3_87
Type: TC
Location: 102524 - 103102 (-)
Type: TC
Location: 102524 - 103102 (-)
Gene ID: HRGMv2_3200_3_88
Type: TF
Location: 103302 - 103550 (+)
Type: TF
Location: 103302 - 103550 (+)
Gene ID: HRGMv2_3200_3_89
Type: CAZyme
Location: 103706 - 104623 (-)
Type: CAZyme
Location: 103706 - 104623 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.