Cluster: HRGMv2_3200_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_21 | HRGMv2_3200_21_1 | 159 | 1010 | + | 2.A.119.2.1 |
| pfam | HRGMv2_3200_21 | HRGMv2_3200_21_2 | 1227 | 1637 | + | CDP-OH_P_transf |
| STP | HRGMv2_3200_21 | HRGMv2_3200_21_3 | 1814 | 2041 | + | FeoA |
| TC | HRGMv2_3200_21 | HRGMv2_3200_21_4 | 2038 | 4083 | + | 9.A.8.1.6 |
| TC | HRGMv2_3200_21 | HRGMv2_3200_21_5 | 4183 | 6297 | - | 3.A.3.32.6 |
| NULL(UNKNOWN) | HRGMv2_3200_21 | HRGMv2_3200_21_6 | 6300 | 6545 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_3200_21 | HRGMv2_3200_21_7 | 6810 | 8075 | - | M26.UPW |
| TC | HRGMv2_3200_21 | HRGMv2_3200_21_8 | 8147 | 9877 | - | 3.A.1.106.1 |
| TC | HRGMv2_3200_21 | HRGMv2_3200_21_9 | 9874 | 11616 | - | 3.A.1.21.1 |
| STP | HRGMv2_3200_21 | HRGMv2_3200_21_10 | 11739 | 12356 | - | TetR_N |
| pfam | HRGMv2_3200_21 | HRGMv2_3200_21_11 | 12896 | 13453 | - | Flavin_Reduct |
| CAZyme | HRGMv2_3200_21 | HRGMv2_3200_21_12 | 13717 | 16512 | - | CBM13 | PL1 |
Gene ID: HRGMv2_3200_21_1
Type: TC
Location: 159 - 1010 (+)
Type: TC
Location: 159 - 1010 (+)
Gene ID: HRGMv2_3200_21_2
Type: pfam
Location: 1227 - 1637 (+)
Type: pfam
Location: 1227 - 1637 (+)
Gene ID: HRGMv2_3200_21_3
Type: STP
Location: 1814 - 2041 (+)
Type: STP
Location: 1814 - 2041 (+)
Gene ID: HRGMv2_3200_21_4
Type: TC
Location: 2038 - 4083 (+)
Type: TC
Location: 2038 - 4083 (+)
Gene ID: HRGMv2_3200_21_5
Type: TC
Location: 4183 - 6297 (-)
Type: TC
Location: 4183 - 6297 (-)
Gene ID: HRGMv2_3200_21_6
Type:
Location: 6300 - 6545 (-)
Type:
Location: 6300 - 6545 (-)
Gene ID: HRGMv2_3200_21_7
Type: peptidase
Location: 6810 - 8075 (-)
Type: peptidase
Location: 6810 - 8075 (-)
Gene ID: HRGMv2_3200_21_8
Type: TC
Location: 8147 - 9877 (-)
Type: TC
Location: 8147 - 9877 (-)
Gene ID: HRGMv2_3200_21_9
Type: TC
Location: 9874 - 11616 (-)
Type: TC
Location: 9874 - 11616 (-)
Gene ID: HRGMv2_3200_21_10
Type: STP
Location: 11739 - 12356 (-)
Type: STP
Location: 11739 - 12356 (-)
Gene ID: HRGMv2_3200_21_11
Type: pfam
Location: 12896 - 13453 (-)
Type: pfam
Location: 12896 - 13453 (-)
Gene ID: HRGMv2_3200_21_12
Type: CAZyme
Location: 13717 - 16512 (-)
Type: CAZyme
Location: 13717 - 16512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.