Cluster: HRGMv2_3200_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3200_20 | HRGMv2_3200_20_16 | 20498 | 22477 | + | CBM2 | GH5_1 |
| CAZyme | HRGMv2_3200_20 | HRGMv2_3200_20_17 | 22527 | 23792 | - | CE17 |
| TC | HRGMv2_3200_20 | HRGMv2_3200_20_18 | 23928 | 25070 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_3200_20_16
Type: CAZyme
Location: 20498 - 22477 (+)
Type: CAZyme
Location: 20498 - 22477 (+)
Gene ID: HRGMv2_3200_20_17
Type: CAZyme
Location: 22527 - 23792 (-)
Type: CAZyme
Location: 22527 - 23792 (-)
Gene ID: HRGMv2_3200_20_18
Type: TC
Location: 23928 - 25070 (-)
Type: TC
Location: 23928 - 25070 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.