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Cluster: HRGMv2_3200_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3200_1 HRGMv2_3200_1_206 208814 209893 - CE2
TC HRGMv2_3200_1 HRGMv2_3200_1_207 210117 211889 - 1.A.11.2.7
pfam HRGMv2_3200_1 HRGMv2_3200_1_208 212075 214153 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
pfam HRGMv2_3200_1 HRGMv2_3200_1_209 214355 214960 - DUF308 | DUF308 | DUF308
TC HRGMv2_3200_1 HRGMv2_3200_1_210 214975 215595 - 3.A.2.3.2
NULL(UNKNOWN) HRGMv2_3200_1 HRGMv2_3200_1_211 215620 215817 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3200_1 HRGMv2_3200_1_212 215824 217227 - 3.A.2.3.3
TC HRGMv2_3200_1 HRGMv2_3200_1_213 217228 218985 - 3.A.2.3.1
Gene ID: HRGMv2_3200_1_206
Type: CAZyme
Location: 208814 - 209893 (-)
Gene ID: HRGMv2_3200_1_207
Type: TC
Location: 210117 - 211889 (-)
Gene ID: HRGMv2_3200_1_208
Type: pfam
Location: 212075 - 214153 (-)
Gene ID: HRGMv2_3200_1_209
Type: pfam
Location: 214355 - 214960 (-)
Gene ID: HRGMv2_3200_1_210
Type: TC
Location: 214975 - 215595 (-)
Gene ID: HRGMv2_3200_1_211
Type:
Location: 215620 - 215817 (-)
Gene ID: HRGMv2_3200_1_212
Type: TC
Location: 215824 - 217227 (-)
Gene ID: HRGMv2_3200_1_213
Type: TC
Location: 217228 - 218985 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Hominimerdicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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