Cluster: HRGMv2_3200_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3200_16 | HRGMv2_3200_16_19 | 16150 | 19761 | - | GH5_8 |
| pfam | HRGMv2_3200_16 | HRGMv2_3200_16_20 | 20559 | 25259 | + | Lipase_3 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| TC | HRGMv2_3200_16 | HRGMv2_3200_16_21 | 27349 | 28755 | - | 2.A.66.2.16 |
Gene ID: HRGMv2_3200_16_19
Type: CAZyme
Location: 16150 - 19761 (-)
Type: CAZyme
Location: 16150 - 19761 (-)
Gene ID: HRGMv2_3200_16_20
Type: pfam
Location: 20559 - 25259 (+)
Type: pfam
Location: 20559 - 25259 (+)
Gene ID: HRGMv2_3200_16_21
Type: TC
Location: 27349 - 28755 (-)
Type: TC
Location: 27349 - 28755 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.