Cluster: HRGMv2_3200_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_15 | HRGMv2_3200_15_43 | 47249 | 48832 | - | 2.A.53.3.11 |
| TF | HRGMv2_3200_15 | HRGMv2_3200_15_44 | 49241 | 49912 | + | Trans_reg_C |
| STP | HRGMv2_3200_15 | HRGMv2_3200_15_45 | 49912 | 50919 | + | HATPase_c | HisKA |
| TC | HRGMv2_3200_15 | HRGMv2_3200_15_46 | 51054 | 51734 | + | 3.A.1.122.14 |
| pfam | HRGMv2_3200_15 | HRGMv2_3200_15_47 | 51734 | 53998 | + | FtsX | FtsX |
| CAZyme | HRGMv2_3200_15 | HRGMv2_3200_15_48 | 54585 | 56549 | + | CBM65 | GH53 |
Gene ID: HRGMv2_3200_15_43
Type: TC
Location: 47249 - 48832 (-)
Type: TC
Location: 47249 - 48832 (-)
Gene ID: HRGMv2_3200_15_44
Type: TF
Location: 49241 - 49912 (+)
Type: TF
Location: 49241 - 49912 (+)
Gene ID: HRGMv2_3200_15_45
Type: STP
Location: 49912 - 50919 (+)
Type: STP
Location: 49912 - 50919 (+)
Gene ID: HRGMv2_3200_15_46
Type: TC
Location: 51054 - 51734 (+)
Type: TC
Location: 51054 - 51734 (+)
Gene ID: HRGMv2_3200_15_47
Type: pfam
Location: 51734 - 53998 (+)
Type: pfam
Location: 51734 - 53998 (+)
Gene ID: HRGMv2_3200_15_48
Type: CAZyme
Location: 54585 - 56549 (+)
Type: CAZyme
Location: 54585 - 56549 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.