Cluster: HRGMv2_3196_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3196
- CGC Family ID: CGCFAM_00876
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3196_3 | HRGMv2_3196_3_39 | 34089 | 35894 | + | 9.B.33.1.1 |
| NULL(UNKNOWN) | HRGMv2_3196_3 | HRGMv2_3196_3_40 | 36336 | 38099 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3196_3 | HRGMv2_3196_3_41 | 38143 | 39060 | - | 3.A.1.1.29 |
| TC | HRGMv2_3196_3 | HRGMv2_3196_3_42 | 39079 | 40029 | - | 3.A.1.1.29 |
| CAZyme | HRGMv2_3196_3 | HRGMv2_3196_3_43 | 40267 | 42297 | + | GH42 |
Gene ID: HRGMv2_3196_3_39
Type: TC
Location: 34089 - 35894 (+)
Type: TC
Location: 34089 - 35894 (+)
Gene ID: HRGMv2_3196_3_40
Type:
Location: 36336 - 38099 (-)
Type:
Location: 36336 - 38099 (-)
Gene ID: HRGMv2_3196_3_41
Type: TC
Location: 38143 - 39060 (-)
Type: TC
Location: 38143 - 39060 (-)
Gene ID: HRGMv2_3196_3_42
Type: TC
Location: 39079 - 40029 (-)
Type: TC
Location: 39079 - 40029 (-)
Gene ID: HRGMv2_3196_3_43
Type: CAZyme
Location: 40267 - 42297 (+)
Type: CAZyme
Location: 40267 - 42297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Heritagella
Species
Heritagella sp905200265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.