PROTEIN: HRGMv2_3196_3_40
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Protein File & Metadata
Source:
HRGMv2_3196_3_40.pdb
Genome ID:
Protein ID:
HRGMv2_3196_3_40
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Protein Sequence
MFKKTVSALL AVAMAATALA GCSGDAGSSQ GGTESQSGSQ GSDSKYADFL TIDVFDSYAN 60 YQGIQGGWYG EIIKEKFNME LNIIAPNVAG GGDTLFQTRS AAGNIGDIIL TTAQGERLQD 120 LVTAGLIADM TPYITDEHES FKMYEEAIAY TSENMVEEDG IWCVPSEVST RAATDSLGGT 180 DPNGAAYIRW DLYKELGYPE IGTMEDLLDV MEDMQALCPT SDSGQKVYAF SLFKDWDDAG 240 MSNVSHLSAF YGYDSLGFVS YKADGSGEIE DMLQDDSMYL RGIRFYNEAY RRGLVDPEST 300 TQNYDTLVGK YQDGAVLYSP FPWLGASAYN TDAHTSEGKG FMMAEVKDET VRQWGCYSKG 360 NTEIVAMVGS KAQDPQRMVD FINWLYSTEG IACSMNRYCG PEGVLWTMED GQPVLTELGE 420 QCFIEGDGTM PEEYGGGSWL EGSSKLEYKI ISAGEINPET GFPYDPGLWD SYAELNTNPV 480 IEDWQAHMDA KNAIDYLQKN DQLMTSPGIS FASPSDDTEI ATLRAQCKSV LVENSWKAVF 540 ADSEEDCERY IQEMISTVKG LGYDDIVAVD KENAQLKRDA WSEAAAE 587
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 15 | 583 | 12 | 502 | 0.6397 |
0.7213 |
| AF-Q8DRJ6-F1-model_v4 | 47 | 586 | 59 | 514 | 0.5648 |
0.6862 |
| AF-A0A132Z3C8-F1-model_v4 | 33 | 569 | 22 | 427 | 0.5507 |
0.6798 |
| AF-Q32AT3-F1-model_v4 | 36 | 573 | 15 | 434 | 0.5474 |
0.6658 |
| AF-P0AG80-F1-model_v4 | 36 | 573 | 15 | 433 | 0.5452 |
0.6635 |
| AF-Q9CCA3-F1-model_v4 | 19 | 569 | 18 | 462 | 0.5415 |
0.6454 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 44 | 583 | 43 | 506 | 0.6369 |
0.7568 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 46 | 575 | 26 | 742 | 0.4362 |
0.542 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 44 | 583 | 43 | 506 | 0.6369 |
0.7568 |
| A0A7U1BNH7 | GH10 | 46 | 575 | 26 | 742 | 0.4362 |
0.542 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5xs8-assembly1.cif.gz_A | 49 | 580 | 1 | 474 | 0.7096 |
0.8014 |
| 5g62-assembly2.cif.gz_B | 48 | 587 | 1 | 491 | 0.707 |
0.787 |
| 6fth-assembly1.cif.gz_A | 46 | 586 | 1 | 496 | 0.6946 |
0.7698 |
| 3omb-assembly1.cif.gz_A | 44 | 583 | 3 | 503 | 0.6945 |
0.7674 |
| 4tqu-assembly1.cif.gz_Q | 40 | 586 | 1 | 492 | 0.6891 |
0.7681 |
| 5h6u-assembly1.cif.gz_A | 43 | 583 | 1 | 487 | 0.688 |
0.7698 |
| 3vlw-assembly2.cif.gz_B | 41 | 583 | 1 | 489 | 0.6859 |
0.7667 |
| 6jhx-assembly2.cif.gz_B | 40 | 583 | 1 | 483 | 0.6846 |
0.7682 |
| 5g5y-assembly1.cif.gz_A | 43 | 587 | 1 | 494 | 0.6762 |
0.7538 |
| 7c71-assembly2.cif.gz_B | 50 | 573 | 1 | 415 | 0.5908 |
0.706 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 43 | 587 | 42 | 538 | 0.6653 |
0.7651 |
| AF-P37966-F1-model_v4 | 45 | 583 | 31 | 502 | 0.6477 |
0.7553 |
| AF-Q795R2-F1-model_v4 | 43 | 583 | 37 | 498 | 0.6128 |
0.7259 |
| AF-O58758-F1-model_v4 | 16 | 573 | 3 | 420 | 0.5659 |
0.6761 |
| AF-Q7LYW7-F1-model_v4 | 42 | 576 | 37 | 450 | 0.5629 |
0.6997 |
| AF-Q9KEE7-F1-model_v4 | 8 | 570 | 24 | 443 | 0.5579 |
0.6807 |
| AF-O58969-F1-model_v4 | 40 | 585 | 32 | 441 | 0.5521 |
0.6867 |
| AF-O34335-F1-model_v4 | 19 | 569 | 21 | 415 | 0.5477 |
0.6908 |
| AF-Q32AT3-F1-model_v4 | 36 | 573 | 15 | 434 | 0.5474 |
0.6658 |
| AF-Q7CPK0-F1-model_v4 | 37 | 573 | 16 | 434 | 0.5474 |
0.6668 |