Cluster: HRGMv2_3195_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3195
- CGC Family ID: CGCFAM_02194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3195_31 | HRGMv2_3195_31_1 | 2 | 1708 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_3195_31 | HRGMv2_3195_31_2 | 1962 | 3938 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3195_31 | HRGMv2_3195_31_3 | 4594 | 5535 | + | GT2 |
| TF | HRGMv2_3195_31 | HRGMv2_3195_31_4 | 5680 | 6003 | + | HTH_5 |
| TC | HRGMv2_3195_31 | HRGMv2_3195_31_5 | 6100 | 7104 | + | 2.A.119.1.3 |
Gene ID: HRGMv2_3195_31_1
Type: TC
Location: 2 - 1708 (+)
Type: TC
Location: 2 - 1708 (+)
Gene ID: HRGMv2_3195_31_2
Type:
Location: 1962 - 3938 (+)
Type:
Location: 1962 - 3938 (+)
Gene ID: HRGMv2_3195_31_3
Type: CAZyme
Location: 4594 - 5535 (+)
Type: CAZyme
Location: 4594 - 5535 (+)
Gene ID: HRGMv2_3195_31_4
Type: TF
Location: 5680 - 6003 (+)
Type: TF
Location: 5680 - 6003 (+)
Gene ID: HRGMv2_3195_31_5
Type: TC
Location: 6100 - 7104 (+)
Type: TC
Location: 6100 - 7104 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.