PROTEIN: HRGMv2_3195_31_2
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Protein File & Metadata
Source:
HRGMv2_3195_31_2.pdb
Genome ID:
Protein ID:
HRGMv2_3195_31_2
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Protein Sequence
MTVACVAILS HVYTIRFRKY KSHGLLWLYV LFILGVTFFR GLIPDTGFDT LNYHLLSQEA 60 FRNGFEGNCA PGNFQLYGFA LGDKLYALPR LLFGYRAGSM FSGIVLCLIL YQVSELLHLL 120 CGTRLAALRK RYFSGPITKY LSFVLREETW AFLAVFVHDA VMLLGSYYVE LYAVVFLLEA 180 AYQLVCPKEP TPEDAVLFIL CGGFLFAIKM TNIVYLLPLV ILYLIKIRRI LTPALFFVCL 240 AIGFFPCAPY LLIDWVVYGN PVFPYFNKVF QSPYFPLLNF KDGRFGPQTV VQALLWPLYM 300 IFDPGNRQSE ISMTWTGGLA AAMAATLLVV LVCAWNLVRN KRVRWDVACL AIITVVSFAL 360 WEATTSISRY YIGGYVLLNC LCVWFTVEYL LRKKWWKILL GCLCSVALLL QSVSAFDEYL 420 DGWEWSWRKV SVQSIGENVG YLFRDRALQD TDPHPDAYFA VDFLAGLSQS LLPETPIYNM 480 EYLYNTLGGK EQERLLAETE KWLDGGNAYL LSNSNSFGVD FIEKMNQYGL YADSISVVHN 540 HVYETLWDSL QLHVVSMDEG QSNVLYTTPF TMESNGESHL NAQGYGGKTV AGLYLQLQDD 600 AGNEIVSVPI SEDGTVEMSV DLPPTAGDTL IWTLTDSQGE PVSEDGPALL VLNPQFVD 658
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 12 | 646 | 3 | 516 | 0.6217 |
0.7118 |
| AF-K0F1P6-F1-model_v4 | 19 | 559 | 19 | 498 | 0.6197 |
0.7487 |
| AF-K0EN63-F1-model_v4 | 20 | 658 | 1 | 521 | 0.6129 |
0.71 |
| AF-Q9HUZ2-F1-model_v4 | 23 | 643 | 7 | 478 | 0.6076 |
0.7237 |
| AF-G5EDN2-F1-model_v4 | 17 | 658 | 1 | 494 | 0.5978 |
0.6961 |
| AF-K0F580-F1-model_v4 | 39 | 559 | 1 | 462 | 0.5937 |
0.717 |
| AF-K0F428-F1-model_v4 | 15 | 645 | 22 | 665 | 0.581 |
0.6216 |
| AF-K0EVV4-F1-model_v4 | 15 | 645 | 22 | 662 | 0.5805 |
0.6188 |
| AF-A4ICL4-F1-model_v4 | 19 | 658 | 12 | 618 | 0.5799 |
0.6275 |
| AF-A0A0R4IE52-F1-model_v4 | 22 | 640 | 5 | 500 | 0.5773 |
0.6743 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q9MAY1 | GT0 | 19 | 559 | 2 | 470 | 0.6267 |
0.75 |
| A0A9X5B2Y9 | GT0 | 20 | 559 | 3 | 474 | 0.6265 |
0.7459 |
| AF-A0A0E3B747-F1-model_v4 | GT89 | 19 | 648 | 3 | 545 | 0.6212 |
0.7065 |
| WCL48209.1 | GT22 | 7 | 554 | 3 | 490 | 0.6205 |
0.7299 |
| AF-A0A3S4MTL6-F1-model_v4 | GT83 | 23 | 644 | 7 | 478 | 0.6109 |
0.7276 |
| A0A3D9XR71 | GT83 | 22 | 646 | 3 | 517 | 0.6051 |
0.6941 |
| AF-A0A518EX71-F1-model_v4 | GT83 | 25 | 644 | 1 | 525 | 0.6046 |
0.6848 |
| A0A7M2ZZ44 | GT83 | 23 | 643 | 7 | 478 | 0.6041 |
0.7201 |
| A0A1G6LGN7 | GT83 | 23 | 555 | 9 | 537 | 0.6036 |
0.6872 |
| AF-A0A068NUM4-F1-model_v4 | GT83 | 25 | 555 | 1 | 475 | 0.6035 |
0.7123 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1L9GN74 | GT83 | 20 | 561 | 4 | 495 | 0.6563 |
0.7656 |
| UCV14583.1 | GT83 | 19 | 559 | 11 | 488 | 0.6489 |
0.7709 |
| A0A223CZC2 | GT89 | 19 | 650 | 9 | 537 | 0.6405 |
0.7266 |
| I4C5C6 | GT89 | 19 | 650 | 12 | 541 | 0.6393 |
0.7269 |
| A0A2Z4Y6P6 | GT83 | 19 | 556 | 4 | 495 | 0.623 |
0.7273 |
| A0A6C2YNQ2 | GT83 | 17 | 559 | 23 | 504 | 0.6218 |
0.7444 |
| WCL48209.1 | GT22 | 7 | 554 | 3 | 490 | 0.6205 |
0.7299 |
| A0A1B1PXR7 | GT89 | 23 | 559 | 15 | 521 | 0.617 |
0.7186 |
| A0A6M8W970 | GT83 | 19 | 559 | 10 | 525 | 0.6139 |
0.7059 |
| H5SCZ1 | GT83 | 18 | 559 | 16 | 561 | 0.6115 |
0.6989 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MLH5-F1-model_v4 | 19 | 559 | 2 | 470 | 0.6299 |
0.7484 |
| AF-Q753C1-F1-model_v4 | 25 | 657 | 2 | 497 | 0.5944 |
0.6919 |
| AF-P30777-F1-model_v4 | 14 | 603 | 2 | 616 | 0.5707 |
0.6302 |
| AF-Q94A15-F1-model_v4 | 19 | 658 | 34 | 544 | 0.5696 |
0.6749 |
| AF-Q8MXQ3-F1-model_v4 | 15 | 621 | 105 | 776 | 0.5535 |
0.6695 |
| AF-Q9USD4-F1-model_v4 | 18 | 645 | 1 | 539 | 0.5517 |
0.6232 |
| AF-Q4WPG0-F1-model_v4 | 14 | 658 | 43 | 658 | 0.5163 |
0.6012 |
| AF-Q2UH15-F1-model_v4 | 19 | 658 | 51 | 640 | 0.5116 |
0.6039 |