Cluster: HRGMv2_3194_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3194_3 | HRGMv2_3194_3_13 | 14681 | 16069 | + | GH32 |
| TC | HRGMv2_3194_3 | HRGMv2_3194_3_14 | 16066 | 17460 | + | 4.A.1.2.9 |
| CAZyme | HRGMv2_3194_3 | HRGMv2_3194_3_15 | 17457 | 19634 | + | GH36 |
Gene ID: HRGMv2_3194_3_13
Type: CAZyme
Location: 14681 - 16069 (+)
Type: CAZyme
Location: 14681 - 16069 (+)
Gene ID: HRGMv2_3194_3_14
Type: TC
Location: 16066 - 17460 (+)
Type: TC
Location: 16066 - 17460 (+)
Gene ID: HRGMv2_3194_3_15
Type: CAZyme
Location: 17457 - 19634 (+)
Type: CAZyme
Location: 17457 - 19634 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.