Cluster: HRGMv2_3194_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3194_13 | HRGMv2_3194_13_5 | 7431 | 9335 | - | GH42 |
| NULL(UNKNOWN) | HRGMv2_3194_13 | HRGMv2_3194_13_6 | 9427 | 10122 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3194_13 | HRGMv2_3194_13_7 | 10119 | 10769 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3194_13 | HRGMv2_3194_13_8 | 10772 | 11683 | - | 3.A.1.105.12 |
Gene ID: HRGMv2_3194_13_5
Type: CAZyme
Location: 7431 - 9335 (-)
Type: CAZyme
Location: 7431 - 9335 (-)
Gene ID: HRGMv2_3194_13_6
Type:
Location: 9427 - 10122 (-)
Type:
Location: 9427 - 10122 (-)
Gene ID: HRGMv2_3194_13_7
Type:
Location: 10119 - 10769 (-)
Type:
Location: 10119 - 10769 (-)
Gene ID: HRGMv2_3194_13_8
Type: TC
Location: 10772 - 11683 (-)
Type: TC
Location: 10772 - 11683 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.