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Cluster: HRGMv2_3194_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3194_1 HRGMv2_3194_1_79 87096 88862 + GH13_9
NULL(UNKNOWN) HRGMv2_3194_1 HRGMv2_3194_1_80 88998 89141 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3194_1 HRGMv2_3194_1_81 89422 90756 + 3.D.6.1.2
TC HRGMv2_3194_1 HRGMv2_3194_1_82 90759 91739 + 3.D.6.1.1
pfam HRGMv2_3194_1 HRGMv2_3194_1_83 91739 92323 + FMN_bind
TC HRGMv2_3194_1 HRGMv2_3194_1_84 92326 93012 + 3.D.6.1.2
TC HRGMv2_3194_1 HRGMv2_3194_1_85 93009 93647 + 3.D.6.1.2
TC HRGMv2_3194_1 HRGMv2_3194_1_86 93668 94504 + 3.D.6.1.3
pfam HRGMv2_3194_1 HRGMv2_3194_1_87 94583 95515 - NTP_transferase
pfam HRGMv2_3194_1 HRGMv2_3194_1_88 95745 96926 + Patatin
TC HRGMv2_3194_1 HRGMv2_3194_1_89 96993 98588 + 8.A.7.1.5
Gene ID: HRGMv2_3194_1_79
Type: CAZyme
Location: 87096 - 88862 (+)
Gene ID: HRGMv2_3194_1_80
Type:
Location: 88998 - 89141 (-)
Gene ID: HRGMv2_3194_1_81
Type: TC
Location: 89422 - 90756 (+)
Gene ID: HRGMv2_3194_1_82
Type: TC
Location: 90759 - 91739 (+)
Gene ID: HRGMv2_3194_1_83
Type: pfam
Location: 91739 - 92323 (+)
Gene ID: HRGMv2_3194_1_84
Type: TC
Location: 92326 - 93012 (+)
Gene ID: HRGMv2_3194_1_85
Type: TC
Location: 93009 - 93647 (+)
Gene ID: HRGMv2_3194_1_86
Type: TC
Location: 93668 - 94504 (+)
Gene ID: HRGMv2_3194_1_87
Type: pfam
Location: 94583 - 95515 (-)
Gene ID: HRGMv2_3194_1_88
Type: pfam
Location: 95745 - 96926 (+)
Gene ID: HRGMv2_3194_1_89
Type: TC
Location: 96993 - 98588 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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