Cluster: HRGMv2_3194_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3194_5 | HRGMv2_3194_5_85 | 106630 | 108006 | - | 2.A.66.1.32 |
| TC | HRGMv2_3194_5 | HRGMv2_3194_5_86 | 108187 | 109773 | - | 2.A.2.3.5 |
| CAZyme | HRGMv2_3194_5 | HRGMv2_3194_5_87 | 109932 | 112895 | - | GH3 |
| CAZyme | HRGMv2_3194_5 | HRGMv2_3194_5_88 | 113100 | 115034 | - | GH2 |
Gene ID: HRGMv2_3194_5_85
Type: TC
Location: 106630 - 108006 (-)
Type: TC
Location: 106630 - 108006 (-)
Gene ID: HRGMv2_3194_5_86
Type: TC
Location: 108187 - 109773 (-)
Type: TC
Location: 108187 - 109773 (-)
Gene ID: HRGMv2_3194_5_87
Type: CAZyme
Location: 109932 - 112895 (-)
Type: CAZyme
Location: 109932 - 112895 (-)
Gene ID: HRGMv2_3194_5_88
Type: CAZyme
Location: 113100 - 115034 (-)
Type: CAZyme
Location: 113100 - 115034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.