Cluster: HRGMv2_3194_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3194
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3194_4 | HRGMv2_3194_4_53 | 56109 | 58514 | + | GT35 |
| CAZyme | HRGMv2_3194_4 | HRGMv2_3194_4_54 | 58612 | 60462 | + | GH13_39 |
| pfam | HRGMv2_3194_4 | HRGMv2_3194_4_55 | 60669 | 61109 | + | NfeD |
| TC | HRGMv2_3194_4 | HRGMv2_3194_4_56 | 61189 | 62106 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_3194_4_53
Type: CAZyme
Location: 56109 - 58514 (+)
Type: CAZyme
Location: 56109 - 58514 (+)
Gene ID: HRGMv2_3194_4_54
Type: CAZyme
Location: 58612 - 60462 (+)
Type: CAZyme
Location: 58612 - 60462 (+)
Gene ID: HRGMv2_3194_4_55
Type: pfam
Location: 60669 - 61109 (+)
Type: pfam
Location: 60669 - 61109 (+)
Gene ID: HRGMv2_3194_4_56
Type: TC
Location: 61189 - 62106 (+)
Type: TC
Location: 61189 - 62106 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.