Cluster: HRGMv2_3185_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_2 | HRGMv2_3185_2_68 | 75025 | 77430 | + | GT35 |
| CAZyme | HRGMv2_3185_2 | HRGMv2_3185_2_69 | 77527 | 79377 | + | GH13_39 |
| pfam | HRGMv2_3185_2 | HRGMv2_3185_2_70 | 79593 | 80033 | + | NfeD |
| TC | HRGMv2_3185_2 | HRGMv2_3185_2_71 | 80113 | 81033 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_3185_2_68
Type: CAZyme
Location: 75025 - 77430 (+)
Type: CAZyme
Location: 75025 - 77430 (+)
Gene ID: HRGMv2_3185_2_69
Type: CAZyme
Location: 77527 - 79377 (+)
Type: CAZyme
Location: 77527 - 79377 (+)
Gene ID: HRGMv2_3185_2_70
Type: pfam
Location: 79593 - 80033 (+)
Type: pfam
Location: 79593 - 80033 (+)
Gene ID: HRGMv2_3185_2_71
Type: TC
Location: 80113 - 81033 (+)
Type: TC
Location: 80113 - 81033 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.