Cluster: HRGMv2_3185_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_1 | HRGMv2_3185_1_179 | 233139 | 234239 | + | GH88 |
| CAZyme | HRGMv2_3185_1 | HRGMv2_3185_1_180 | 234255 | 237323 | + | GH38 |
| CAZyme | HRGMv2_3185_1 | HRGMv2_3185_1_181 | 237356 | 239095 | + | GH154 |
| TC | HRGMv2_3185_1 | HRGMv2_3185_1_182 | 239284 | 240447 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_3185_1_179
Type: CAZyme
Location: 233139 - 234239 (+)
Type: CAZyme
Location: 233139 - 234239 (+)
Gene ID: HRGMv2_3185_1_180
Type: CAZyme
Location: 234255 - 237323 (+)
Type: CAZyme
Location: 234255 - 237323 (+)
Gene ID: HRGMv2_3185_1_181
Type: CAZyme
Location: 237356 - 239095 (+)
Type: CAZyme
Location: 237356 - 239095 (+)
Gene ID: HRGMv2_3185_1_182
Type: TC
Location: 239284 - 240447 (-)
Type: TC
Location: 239284 - 240447 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.