Cluster: HRGMv2_3185_CGC54
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_43 | HRGMv2_3185_43_3 | 2358 | 3734 | + | 4.A.1.2.9 |
| CAZyme | HRGMv2_3185_43 | HRGMv2_3185_43_4 | 3736 | 5088 | + | GH32 |
| pfam | HRGMv2_3185_43 | HRGMv2_3185_43_5 | 5180 | 5662 | - | tRNA_edit |
| pfam | HRGMv2_3185_43 | HRGMv2_3185_43_6 | 5682 | 6221 | - | DUF5662 |
| TC | HRGMv2_3185_43 | HRGMv2_3185_43_7 | 6312 | 7220 | - | 2.A.7.3.52 |
Gene ID: HRGMv2_3185_43_3
Type: TC
Location: 2358 - 3734 (+)
Type: TC
Location: 2358 - 3734 (+)
Gene ID: HRGMv2_3185_43_4
Type: CAZyme
Location: 3736 - 5088 (+)
Type: CAZyme
Location: 3736 - 5088 (+)
Gene ID: HRGMv2_3185_43_5
Type: pfam
Location: 5180 - 5662 (-)
Type: pfam
Location: 5180 - 5662 (-)
Gene ID: HRGMv2_3185_43_6
Type: pfam
Location: 5682 - 6221 (-)
Type: pfam
Location: 5682 - 6221 (-)
Gene ID: HRGMv2_3185_43_7
Type: TC
Location: 6312 - 7220 (-)
Type: TC
Location: 6312 - 7220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.