Cluster: HRGMv2_3185_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_19 | HRGMv2_3185_19_3 | 4813 | 5691 | - | 3.A.1.1.29 |
| TC | HRGMv2_3185_19 | HRGMv2_3185_19_4 | 5706 | 6665 | - | 3.A.1.1.10 |
| pfam | HRGMv2_3185_19 | HRGMv2_3185_19_5 | 6900 | 8828 | + | Hepar_II_III_C | Hepar_II_III_N |
| CAZyme | HRGMv2_3185_19 | HRGMv2_3185_19_6 | 8850 | 10724 | + | PL17 |
| pfam | HRGMv2_3185_19 | HRGMv2_3185_19_7 | 10746 | 11894 | + | MPI_cupin_dom |
| TC | HRGMv2_3185_19 | HRGMv2_3185_19_8 | 11917 | 13347 | + | 2.A.66.1.33 |
Gene ID: HRGMv2_3185_19_3
Type: TC
Location: 4813 - 5691 (-)
Type: TC
Location: 4813 - 5691 (-)
Gene ID: HRGMv2_3185_19_4
Type: TC
Location: 5706 - 6665 (-)
Type: TC
Location: 5706 - 6665 (-)
Gene ID: HRGMv2_3185_19_5
Type: pfam
Location: 6900 - 8828 (+)
Type: pfam
Location: 6900 - 8828 (+)
Gene ID: HRGMv2_3185_19_6
Type: CAZyme
Location: 8850 - 10724 (+)
Type: CAZyme
Location: 8850 - 10724 (+)
Gene ID: HRGMv2_3185_19_7
Type: pfam
Location: 10746 - 11894 (+)
Type: pfam
Location: 10746 - 11894 (+)
Gene ID: HRGMv2_3185_19_8
Type: TC
Location: 11917 - 13347 (+)
Type: TC
Location: 11917 - 13347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.