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Cluster: HRGMv2_3185_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_15 HRGMv2_3185_15_15 18384 19355 + 3.A.1.1.29
TC HRGMv2_3185_15 HRGMv2_3185_15_16 19375 20340 + 3.A.1.1.29
pfam HRGMv2_3185_15 HRGMv2_3185_15_17 20412 21923 + DUF3502
pfam HRGMv2_3185_15 HRGMv2_3185_15_18 22163 24559 + Glyco_hydro_38N
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_19 24591 25580 + GH130_2
sulfatase HRGMv2_3185_15 HRGMv2_3185_15_20 25614 27038 + S1_46
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_21 27087 30191 + GH38
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_22 30246 32075 + GH20
pfam HRGMv2_3185_15 HRGMv2_3185_15_23 32095 33375 + MFS_1
CAZyme HRGMv2_3185_15 HRGMv2_3185_15_24 33401 36004 + GH3
Gene ID: HRGMv2_3185_15_15
Type: TC
Location: 18384 - 19355 (+)
Gene ID: HRGMv2_3185_15_16
Type: TC
Location: 19375 - 20340 (+)
Gene ID: HRGMv2_3185_15_17
Type: pfam
Location: 20412 - 21923 (+)
Gene ID: HRGMv2_3185_15_18
Type: pfam
Location: 22163 - 24559 (+)
Gene ID: HRGMv2_3185_15_19
Type: CAZyme
Location: 24591 - 25580 (+)
Gene ID: HRGMv2_3185_15_20
Type: sulfatase
Location: 25614 - 27038 (+)
Gene ID: HRGMv2_3185_15_21
Type: CAZyme
Location: 27087 - 30191 (+)
Gene ID: HRGMv2_3185_15_22
Type: CAZyme
Location: 30246 - 32075 (+)
Gene ID: HRGMv2_3185_15_23
Type: pfam
Location: 32095 - 33375 (+)
Gene ID: HRGMv2_3185_15_24
Type: CAZyme
Location: 33401 - 36004 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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