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Cluster: HRGMv2_3185_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3185_14 HRGMv2_3185_14_24 25956 26888 + 3.A.1.121.4
pfam HRGMv2_3185_14 HRGMv2_3185_14_25 26976 27422 - HSP20 | ArsA_HSP20
TC HRGMv2_3185_14 HRGMv2_3185_14_26 27706 29043 - 2.A.66.1.32
pfam HRGMv2_3185_14 HRGMv2_3185_14_27 29244 30428 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
STP HRGMv2_3185_14 HRGMv2_3185_14_28 30703 32061 + Citrate_synt
CAZyme HRGMv2_3185_14 HRGMv2_3185_14_29 32242 34176 + GH13_14
NULL(UNKNOWN) HRGMv2_3185_14 HRGMv2_3185_14_30 34661 35002 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3185_14 HRGMv2_3185_14_31 35002 36099 + vATP-synt_AC39
TC HRGMv2_3185_14 HRGMv2_3185_14_32 36101 38041 + 3.A.2.3.3
Gene ID: HRGMv2_3185_14_24
Type: TC
Location: 25956 - 26888 (+)
Gene ID: HRGMv2_3185_14_25
Type: pfam
Location: 26976 - 27422 (-)
Gene ID: HRGMv2_3185_14_26
Type: TC
Location: 27706 - 29043 (-)
Gene ID: HRGMv2_3185_14_27
Type: pfam
Location: 29244 - 30428 (-)
Gene ID: HRGMv2_3185_14_28
Type: STP
Location: 30703 - 32061 (+)
Gene ID: HRGMv2_3185_14_29
Type: CAZyme
Location: 32242 - 34176 (+)
Gene ID: HRGMv2_3185_14_30
Type:
Location: 34661 - 35002 (+)
Gene ID: HRGMv2_3185_14_31
Type: pfam
Location: 35002 - 36099 (+)
Gene ID: HRGMv2_3185_14_32
Type: TC
Location: 36101 - 38041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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