Cluster: HRGMv2_3185_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_10298
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_13 | HRGMv2_3185_13_73 | 77626 | 78423 | - | GT2 |
| pfam | HRGMv2_3185_13 | HRGMv2_3185_13_74 | 78420 | 79367 | - | HTS |
| pfam | HRGMv2_3185_13 | HRGMv2_3185_13_75 | 79390 | 80673 | - | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | HRGMv2_3185_13 | HRGMv2_3185_13_76 | 81023 | 83632 | + | 3.A.9.1.2 |
Gene ID: HRGMv2_3185_13_73
Type: CAZyme
Location: 77626 - 78423 (-)
Type: CAZyme
Location: 77626 - 78423 (-)
Gene ID: HRGMv2_3185_13_74
Type: pfam
Location: 78420 - 79367 (-)
Type: pfam
Location: 78420 - 79367 (-)
Gene ID: HRGMv2_3185_13_75
Type: pfam
Location: 79390 - 80673 (-)
Type: pfam
Location: 79390 - 80673 (-)
Gene ID: HRGMv2_3185_13_76
Type: TC
Location: 81023 - 83632 (+)
Type: TC
Location: 81023 - 83632 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.