Cluster: HRGMv2_3185_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_10 | HRGMv2_3185_10_34 | 30341 | 31255 | + | 3.A.1.105.18 |
| NULL(UNKNOWN) | HRGMv2_3185_10 | HRGMv2_3185_10_35 | 31258 | 31908 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3185_10 | HRGMv2_3185_10_36 | 31905 | 32600 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3185_10 | HRGMv2_3185_10_37 | 32695 | 34599 | + | GH42 |
Gene ID: HRGMv2_3185_10_34
Type: TC
Location: 30341 - 31255 (+)
Type: TC
Location: 30341 - 31255 (+)
Gene ID: HRGMv2_3185_10_35
Type:
Location: 31258 - 31908 (+)
Type:
Location: 31258 - 31908 (+)
Gene ID: HRGMv2_3185_10_36
Type:
Location: 31905 - 32600 (+)
Type:
Location: 31905 - 32600 (+)
Gene ID: HRGMv2_3185_10_37
Type: CAZyme
Location: 32695 - 34599 (+)
Type: CAZyme
Location: 32695 - 34599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.