Cluster: HRGMv2_3185_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3185
- CGC Family ID: CGCFAM_10327
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_94 | 95559 | 97322 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_3185_8 | HRGMv2_3185_8_95 | 97489 | 99042 | + | GH77 |
| pfam | HRGMv2_3185_8 | HRGMv2_3185_8_96 | 99052 | 100506 | - | Polysacc_synt |
| pfam | HRGMv2_3185_8 | HRGMv2_3185_8_97 | 100689 | 101510 | + | PNP_UDP_1 |
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_98 | 101680 | 102504 | + | 3.A.1.132.3 |
| TC | HRGMv2_3185_8 | HRGMv2_3185_8_99 | 102522 | 102998 | + | 1.A.22.1.3 |
Gene ID: HRGMv2_3185_8_94
Type: TC
Location: 95559 - 97322 (+)
Type: TC
Location: 95559 - 97322 (+)
Gene ID: HRGMv2_3185_8_95
Type: CAZyme
Location: 97489 - 99042 (+)
Type: CAZyme
Location: 97489 - 99042 (+)
Gene ID: HRGMv2_3185_8_96
Type: pfam
Location: 99052 - 100506 (-)
Type: pfam
Location: 99052 - 100506 (-)
Gene ID: HRGMv2_3185_8_97
Type: pfam
Location: 100689 - 101510 (+)
Type: pfam
Location: 100689 - 101510 (+)
Gene ID: HRGMv2_3185_8_98
Type: TC
Location: 101680 - 102504 (+)
Type: TC
Location: 101680 - 102504 (+)
Gene ID: HRGMv2_3185_8_99
Type: TC
Location: 102522 - 102998 (+)
Type: TC
Location: 102522 - 102998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.