Cluster: HRGMv2_3185_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3185
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3185_7 | HRGMv2_3185_7_66 | 70848 | 72014 | - | GT4 |
| CAZyme | HRGMv2_3185_7 | HRGMv2_3185_7_67 | 72011 | 73267 | - | GH3 |
| STP | HRGMv2_3185_7 | HRGMv2_3185_7_68 | 73405 | 73980 | - | cNMP_binding |
| STP | HRGMv2_3185_7 | HRGMv2_3185_7_69 | 74312 | 76873 | + | HATPase_c | HisKA | Response_reg | dCache_1 |
| TC | HRGMv2_3185_7 | HRGMv2_3185_7_70 | 76942 | 77841 | - | 2.A.4.7.9 |
Gene ID: HRGMv2_3185_7_66
Type: CAZyme
Location: 70848 - 72014 (-)
Type: CAZyme
Location: 70848 - 72014 (-)
Gene ID: HRGMv2_3185_7_67
Type: CAZyme
Location: 72011 - 73267 (-)
Type: CAZyme
Location: 72011 - 73267 (-)
Gene ID: HRGMv2_3185_7_68
Type: STP
Location: 73405 - 73980 (-)
Type: STP
Location: 73405 - 73980 (-)
Gene ID: HRGMv2_3185_7_69
Type: STP
Location: 74312 - 76873 (+)
Type: STP
Location: 74312 - 76873 (+)
Gene ID: HRGMv2_3185_7_70
Type: TC
Location: 76942 - 77841 (-)
Type: TC
Location: 76942 - 77841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp905214345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.