Cluster: HRGMv2_3177_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3177
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3177_34 | HRGMv2_3177_34_2 | 946 | 2295 | - | 2.A.66.1.13 |
| TC | HRGMv2_3177_34 | HRGMv2_3177_34_3 | 2701 | 4713 | + | 2.A.16.2.2 |
| peptidase | HRGMv2_3177_34 | HRGMv2_3177_34_4 | 4849 | 5748 | + | S33.UPW |
| CAZyme | HRGMv2_3177_34 | HRGMv2_3177_34_5 | 5880 | 7784 | - | GH31_1 |
Gene ID: HRGMv2_3177_34_2
Type: TC
Location: 946 - 2295 (-)
Type: TC
Location: 946 - 2295 (-)
Gene ID: HRGMv2_3177_34_3
Type: TC
Location: 2701 - 4713 (+)
Type: TC
Location: 2701 - 4713 (+)
Gene ID: HRGMv2_3177_34_4
Type: peptidase
Location: 4849 - 5748 (+)
Type: peptidase
Location: 4849 - 5748 (+)
Gene ID: HRGMv2_3177_34_5
Type: CAZyme
Location: 5880 - 7784 (-)
Type: CAZyme
Location: 5880 - 7784 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.