Cluster: HRGMv2_3177_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3177
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3177_22 | HRGMv2_3177_22_38 | 35598 | 38054 | + | 3.A.9.1.2 |
| STP | HRGMv2_3177_22 | HRGMv2_3177_22_39 | 38248 | 38835 | - | HD |
| CAZyme | HRGMv2_3177_22 | HRGMv2_3177_22_40 | 38874 | 40961 | - | GH13_11 |
Gene ID: HRGMv2_3177_22_38
Type: TC
Location: 35598 - 38054 (+)
Type: TC
Location: 35598 - 38054 (+)
Gene ID: HRGMv2_3177_22_39
Type: STP
Location: 38248 - 38835 (-)
Type: STP
Location: 38248 - 38835 (-)
Gene ID: HRGMv2_3177_22_40
Type: CAZyme
Location: 38874 - 40961 (-)
Type: CAZyme
Location: 38874 - 40961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.