Cluster: HRGMv2_3176_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3176
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3176_2 | HRGMv2_3176_2_147 | 167375 | 170482 | + | CBM13 | CBM35 | CE12 | CE12 |
| pfam | HRGMv2_3176_2 | HRGMv2_3176_2_148 | 170598 | 170783 | - | Ribosomal_L28 |
| TC | HRGMv2_3176_2 | HRGMv2_3176_2_149 | 171022 | 171702 | + | 9.B.149.1.11 |
Gene ID: HRGMv2_3176_2_147
Type: CAZyme
Location: 167375 - 170482 (+)
Type: CAZyme
Location: 167375 - 170482 (+)
Gene ID: HRGMv2_3176_2_148
Type: pfam
Location: 170598 - 170783 (-)
Type: pfam
Location: 170598 - 170783 (-)
Gene ID: HRGMv2_3176_2_149
Type: TC
Location: 171022 - 171702 (+)
Type: TC
Location: 171022 - 171702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp905199285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.