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Cluster: HRGMv2_3176_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3176_9 HRGMv2_3176_9_43 47866 48702 - 3.A.1.15.10
TC HRGMv2_3176_9 HRGMv2_3176_9_44 48705 49409 - 3.A.1.15.5
TC HRGMv2_3176_9 HRGMv2_3176_9_45 49406 50392 - 3.A.1.15.3
TF HRGMv2_3176_9 HRGMv2_3176_9_46 50389 50811 - FUR
NULL(UNKNOWN) HRGMv2_3176_9 HRGMv2_3176_9_47 50938 51546 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3176_9 HRGMv2_3176_9_48 51788 53374 + 2.A.21.2.2
pfam HRGMv2_3176_9 HRGMv2_3176_9_49 53428 54324 - Dockerin_1
pfam HRGMv2_3176_9 HRGMv2_3176_9_50 54339 54989 - PNP_UDP_1
CAZyme HRGMv2_3176_9 HRGMv2_3176_9_51 55385 57445 - CBM79
Gene ID: HRGMv2_3176_9_43
Type: TC
Location: 47866 - 48702 (-)
Gene ID: HRGMv2_3176_9_44
Type: TC
Location: 48705 - 49409 (-)
Gene ID: HRGMv2_3176_9_45
Type: TC
Location: 49406 - 50392 (-)
Gene ID: HRGMv2_3176_9_46
Type: TF
Location: 50389 - 50811 (-)
Gene ID: HRGMv2_3176_9_47
Type:
Location: 50938 - 51546 (-)
Gene ID: HRGMv2_3176_9_48
Type: TC
Location: 51788 - 53374 (+)
Gene ID: HRGMv2_3176_9_49
Type: pfam
Location: 53428 - 54324 (-)
Gene ID: HRGMv2_3176_9_50
Type: pfam
Location: 54339 - 54989 (-)
Gene ID: HRGMv2_3176_9_51
Type: CAZyme
Location: 55385 - 57445 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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