Cluster: HRGMv2_3169_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3169
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3169_7 | HRGMv2_3169_7_43 | 47513 | 49915 | + | GT35 |
| STP | HRGMv2_3169_7 | HRGMv2_3169_7_44 | 49900 | 50814 | + | PfkB |
| STP | HRGMv2_3169_7 | HRGMv2_3169_7_45 | 50834 | 52783 | + | PIG-L |
| TC | HRGMv2_3169_7 | HRGMv2_3169_7_46 | 52780 | 53850 | + | 9.A.23.1.1 |
Gene ID: HRGMv2_3169_7_43
Type: CAZyme
Location: 47513 - 49915 (+)
Type: CAZyme
Location: 47513 - 49915 (+)
Gene ID: HRGMv2_3169_7_44
Type: STP
Location: 49900 - 50814 (+)
Type: STP
Location: 49900 - 50814 (+)
Gene ID: HRGMv2_3169_7_45
Type: STP
Location: 50834 - 52783 (+)
Type: STP
Location: 50834 - 52783 (+)
Gene ID: HRGMv2_3169_7_46
Type: TC
Location: 52780 - 53850 (+)
Type: TC
Location: 52780 - 53850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3169_7_43 | vegetarian > omnivore | 1.00663 | 0.00141 |