Cluster: HRGMv2_3169_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3169
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3169_4 | HRGMv2_3169_4_114 | 108444 | 109811 | - | 3.A.5.1.1 |
| TF | HRGMv2_3169_4 | HRGMv2_3169_4_115 | 109818 | 110174 | - | HTH_11 |
| CAZyme | HRGMv2_3169_4 | HRGMv2_3169_4_116 | 110376 | 117416 | + | GH94 | GT84 |
Gene ID: HRGMv2_3169_4_114
Type: TC
Location: 108444 - 109811 (-)
Type: TC
Location: 108444 - 109811 (-)
Gene ID: HRGMv2_3169_4_115
Type: TF
Location: 109818 - 110174 (-)
Type: TF
Location: 109818 - 110174 (-)
Gene ID: HRGMv2_3169_4_116
Type: CAZyme
Location: 110376 - 117416 (+)
Type: CAZyme
Location: 110376 - 117416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.